STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS20161.1Helix-turn-helix domain-containing protein. (189 aa)    
Predicted Functional Partners:
SIS20168.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.932
SIR18270.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
    0.764
SIS20174.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
       0.594
SIS22190.1
Serine protease, subtilisin family.
  
     0.551
SIQ73873.1
Hypothetical protein.
  
     0.541
SIS20158.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
       0.527
SIQ76094.1
Hypothetical protein.
  
     0.511
SIS11153.1
Regulatory protein, luxR family.
  
     0.508
SIQ49313.1
Enoyl reductase.
  
     0.478
SIS24716.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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