STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS19833.14Fe-4S dicluster containing protein. (357 aa)    
Predicted Functional Partners:
SIS19838.1
NAD(P)H-flavin reductase.
 
 0.996
SIS19842.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
 
  
 0.973
SIS19847.1
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
  
 0.973
SIS19851.1
Hydrogenase maturation protease.
 
   
 0.963
SIQ30661.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.884
SIR54154.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.746
SIQ17706.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.737
SIQ89033.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.730
SIQ97647.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.708
SIR44801.1
L-lactate dehydrogenase complex protein LldG.
  
 
 0.678
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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