STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21228.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (248 aa)    
Predicted Functional Partners:
SIS21232.1
Phosphotransferase enzyme family protein.
 
    
0.638
SIQ46532.1
Transcriptional regulator, ArsR family.
  
     0.511
SIQ46563.1
Hypothetical protein.
  
     0.484
SIR26231.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.447
SIR86449.1
DNA-binding transcriptional activator of the SARP family.
  
     0.430
SIR71447.1
ABC-2 type transport system permease protein.
  
     0.409
SIR84642.1
Catechol 2,3-dioxygenase.
  
     0.406
SIR01214.1
Hypothetical protein.
  
    0.402
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.