STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21483.1Two component transcriptional regulator, LuxR family. (220 aa)    
Predicted Functional Partners:
SIS21477.1
Signal transduction histidine kinase.
 
  0.914
SIR48195.1
Signal transduction histidine kinase.
   
 0.835
SIR65464.1
GAF sensor hybrid histidine kinase.
   
 0.835
SIS25243.1
PAS/PAC sensor signal transduction histidine kinase.
   
 0.763
SIR01559.1
Signal transduction histidine kinase.
  
  0.651
SIR17033.1
Signal transduction histidine kinase.
  
  0.632
SIR47225.1
Signal transduction histidine kinase.
  
  0.624
SIS01036.1
Signal transduction histidine kinase.
  
  0.614
SIR53031.1
Signal transduction histidine kinase.
 
  0.607
SIR05331.1
Signal transduction histidine kinase.
 
  0.606
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.