STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21566.1Transcriptional regulator, AraC family with amidase-like domain. (315 aa)    
Predicted Functional Partners:
SIS21755.1
AraC family transcriptional regulator.
  
     0.571
SIS20655.1
AraC-type DNA-binding protein.
  
   0.508
SIS21571.1
Luciferase family oxidoreductase, group 1.
       0.480
SIS21576.1
Peptide/nickel transport system substrate-binding protein.
       0.480
SIS21580.1
Peptide/nickel transport system permease protein.
       0.480
SIS21585.1
Peptide/nickel transport system permease protein.
       0.480
SIS21590.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.480
SIS21551.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.473
SIS08000.1
AraC-type DNA-binding protein.
  
   0.420
SIQ48389.1
AraC-type DNA-binding protein.
  
   0.418
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.