STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21620.1Amino acid ABC transporter ATP-binding protein, PAAT family. (254 aa)    
Predicted Functional Partners:
SIS21617.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.998
SIR02507.1
Polar amino acid transport system permease protein.
  0.989
SIS24688.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.974
SIS21624.1
Polar amino acid transport system substrate-binding protein.
 0.959
SIS16963.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.949
SIR84837.1
Glutamate transport system permease protein.
 0.944
SIR84862.1
Glutamate transport system permease protein.
 0.944
SIS16970.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.944
SIR63703.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.934
SIR63721.1
Polar amino acid transport system permease protein.
  0.934
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.