Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ30661.1 | SIQ84863.1 | SAMN05421833_101460 | SAMN05421833_10474 | Glutamate synthase (NADPH/NADH) large chain. | Adenylyltransferase and sulfurtransferase. | 0.630 |
SIQ30661.1 | SIQ92305.1 | SAMN05421833_101460 | SAMN05421833_104310 | Glutamate synthase (NADPH/NADH) large chain. | 8-oxo-dGTP diphosphatase. | 0.480 |
SIQ30661.1 | SIR44670.1 | SAMN05421833_101460 | SAMN05421833_10969 | Glutamate synthase (NADPH/NADH) large chain. | uroporphyrinogen-III C-methyltransferase. | 0.765 |
SIQ30661.1 | SIS07784.1 | SAMN05421833_101460 | SAMN05421833_12645 | Glutamate synthase (NADPH/NADH) large chain. | uroporphyrinogen-III synthase. | 0.762 |
SIQ30661.1 | SIS21628.1 | SAMN05421833_101460 | SAMN05421833_14061 | Glutamate synthase (NADPH/NADH) large chain. | Nitroreductase family protein. | 0.464 |
SIQ30661.1 | ribBA | SAMN05421833_101460 | SAMN05421833_101326 | Glutamate synthase (NADPH/NADH) large chain. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.432 |
SIQ84863.1 | SIQ30661.1 | SAMN05421833_10474 | SAMN05421833_101460 | Adenylyltransferase and sulfurtransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.630 |
SIQ84863.1 | SIR44670.1 | SAMN05421833_10474 | SAMN05421833_10969 | Adenylyltransferase and sulfurtransferase. | uroporphyrinogen-III C-methyltransferase. | 0.594 |
SIQ84863.1 | SIS07784.1 | SAMN05421833_10474 | SAMN05421833_12645 | Adenylyltransferase and sulfurtransferase. | uroporphyrinogen-III synthase. | 0.485 |
SIQ84863.1 | SIS21628.1 | SAMN05421833_10474 | SAMN05421833_14061 | Adenylyltransferase and sulfurtransferase. | Nitroreductase family protein. | 0.533 |
SIQ92305.1 | SIQ30661.1 | SAMN05421833_104310 | SAMN05421833_101460 | 8-oxo-dGTP diphosphatase. | Glutamate synthase (NADPH/NADH) large chain. | 0.480 |
SIQ92305.1 | SIR23438.1 | SAMN05421833_104310 | SAMN05421833_10748 | 8-oxo-dGTP diphosphatase. | Probable phosphoglycerate mutase. | 0.757 |
SIQ92305.1 | SIS21628.1 | SAMN05421833_104310 | SAMN05421833_14061 | 8-oxo-dGTP diphosphatase. | Nitroreductase family protein. | 0.455 |
SIQ92305.1 | ribBA | SAMN05421833_104310 | SAMN05421833_101326 | 8-oxo-dGTP diphosphatase. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.692 |
SIR23438.1 | SIQ92305.1 | SAMN05421833_10748 | SAMN05421833_104310 | Probable phosphoglycerate mutase. | 8-oxo-dGTP diphosphatase. | 0.757 |
SIR23438.1 | SIR44670.1 | SAMN05421833_10748 | SAMN05421833_10969 | Probable phosphoglycerate mutase. | uroporphyrinogen-III C-methyltransferase. | 0.655 |
SIR23438.1 | SIS07784.1 | SAMN05421833_10748 | SAMN05421833_12645 | Probable phosphoglycerate mutase. | uroporphyrinogen-III synthase. | 0.526 |
SIR23438.1 | SIS21628.1 | SAMN05421833_10748 | SAMN05421833_14061 | Probable phosphoglycerate mutase. | Nitroreductase family protein. | 0.668 |
SIR44670.1 | SIQ30661.1 | SAMN05421833_10969 | SAMN05421833_101460 | uroporphyrinogen-III C-methyltransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.765 |
SIR44670.1 | SIQ84863.1 | SAMN05421833_10969 | SAMN05421833_10474 | uroporphyrinogen-III C-methyltransferase. | Adenylyltransferase and sulfurtransferase. | 0.594 |
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