STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21772.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (535 aa)    
Predicted Functional Partners:
SIS06616.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.716
SIS07674.1
Cytochrome c biogenesis protein.
  
     0.665
SIR15652.1
Protein of unknown function.
  
     0.661
SIQ27898.1
YggT family protein.
  
     0.612
SIS22196.1
DNA-directed RNA polymerase subunit beta.
  
     0.609
SIS07700.1
Broad specificity phosphatase PhoE.
  
     0.601
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.592
SIR24683.1
Protein of unknown function.
  
     0.589
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.585
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
 
     0.572
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.