STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21895.1Transposase DDE domain group 1. (457 aa)    
Predicted Functional Partners:
SIR53437.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.946
SIQ91222.1
Capsular polysaccharide biosynthesis protein.
  
 0.661
SIR82556.1
Non-specific protein-tyrosine kinase.
  
 0.552
SIS21914.1
Type II secretion system protein F (GspF).
  
     0.542
SIS21924.1
DNA-binding transcriptional activator of the SARP family.
  
     0.536
SIQ85867.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.511
SIS02985.1
Teichoic acid transport system ATP-binding protein.
  
  
 0.509
SIS21905.1
Hypothetical protein.
  
     0.482
SIS21911.1
Flp pilus assembly protein TadB.
  
     0.466
SIS06915.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.