STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS22638.1Ricin-type beta-trefoil lectin domain-like. (197 aa)    
Predicted Functional Partners:
SIR36427.1
Mannan endo-1,4-beta-mannosidase.
  
     0.601
SIR48235.1
Cellulose binding domain-containing protein.
  
     0.586
SIS22643.1
Phosphotransferase enzyme family protein.
       0.539
SIS17630.1
Chitin-binding protein.
  
     0.495
SIR79736.1
Beta-glucanase, GH16 family.
  
     0.490
SIR52990.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
     0.483
SIQ75063.1
Cellulose binding domain-containing protein.
  
     0.479
SIS15881.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
     0.473
SIQ17577.1
Cellulose binding domain-containing protein.
  
     0.467
SIS20977.1
Endoglucanase.
  
     0.466
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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