STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS23192.1[NiFe]-hydrogenase I apoprotein, small subunit. (349 aa)    
Predicted Functional Partners:
SIS23196.1
Hydrogenase large subunit.
 
 0.999
SIS23221.1
Hydrogenase maturation protease.
 
  
 0.972
SIS23217.1
Hypothetical protein.
 
  
 0.971
SIS23200.1
NifU-like domain-containing protein.
 
   
 0.966
SIS23206.1
Hypothetical protein.
 
     0.961
SIS23211.1
Hypothetical protein.
 
     0.961
SIR54154.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.956
SIS23236.1
Hydrogenase expression/formation protein HypC.
 
 
 0.948
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.944
SIS23240.1
Hydrogenase expression/formation protein HypD.
 
  
 0.929
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.