Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS24378.1 | SIS24389.1 | SAMN05421833_1517 | SAMN05421833_15110 | Phage integrase family protein. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.509 |
SIS24378.1 | SIS24398.1 | SAMN05421833_1517 | SAMN05421833_15112 | Phage integrase family protein. | Hypothetical protein. | 0.509 |
SIS24378.1 | SIS24401.1 | SAMN05421833_1517 | SAMN05421833_15113 | Phage integrase family protein. | DGQHR domain-containing protein. | 0.509 |
SIS24378.1 | SIS24404.1 | SAMN05421833_1517 | SAMN05421833_15114 | Phage integrase family protein. | Hypothetical protein. | 0.517 |
SIS24378.1 | SIS24409.1 | SAMN05421833_1517 | SAMN05421833_15115 | Phage integrase family protein. | DGQHR domain-containing protein. | 0.509 |
SIS24378.1 | folE2 | SAMN05421833_1517 | SAMN05421833_15111 | Phage integrase family protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.509 |
SIS24378.1 | queC | SAMN05421833_1517 | SAMN05421833_1518 | Phage integrase family protein. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.773 |
SIS24378.1 | queE | SAMN05421833_1517 | SAMN05421833_1519 | Phage integrase family protein. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.768 |
SIS24389.1 | SIS24378.1 | SAMN05421833_15110 | SAMN05421833_1517 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Phage integrase family protein. | 0.509 |
SIS24389.1 | SIS24398.1 | SAMN05421833_15110 | SAMN05421833_15112 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Hypothetical protein. | 0.837 |
SIS24389.1 | SIS24401.1 | SAMN05421833_15110 | SAMN05421833_15113 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | DGQHR domain-containing protein. | 0.881 |
SIS24389.1 | SIS24404.1 | SAMN05421833_15110 | SAMN05421833_15114 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Hypothetical protein. | 0.870 |
SIS24389.1 | SIS24409.1 | SAMN05421833_15110 | SAMN05421833_15115 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | DGQHR domain-containing protein. | 0.837 |
SIS24389.1 | folE2 | SAMN05421833_15110 | SAMN05421833_15111 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.947 |
SIS24389.1 | queC | SAMN05421833_15110 | SAMN05421833_1518 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.982 |
SIS24389.1 | queE | SAMN05421833_15110 | SAMN05421833_1519 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.997 |
SIS24389.1 | ribBA | SAMN05421833_15110 | SAMN05421833_101326 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.412 |
SIS24398.1 | SIS24378.1 | SAMN05421833_15112 | SAMN05421833_1517 | Hypothetical protein. | Phage integrase family protein. | 0.509 |
SIS24398.1 | SIS24389.1 | SAMN05421833_15112 | SAMN05421833_15110 | Hypothetical protein. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.837 |
SIS24398.1 | SIS24401.1 | SAMN05421833_15112 | SAMN05421833_15113 | Hypothetical protein. | DGQHR domain-containing protein. | 0.837 |
page 1 of 5