STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS25156.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
SIS25159.1
Signal transduction histidine kinase.
   
 0.959
SIS25154.1
Protein of unknown function.
 
  
 0.956
SIR38273.1
Hypothetical protein.
 
 
 0.931
SIR38371.1
Hypothetical protein.
 
 
 0.931
SIS25172.1
Hypothetical protein.
 
 
 0.931
SIR66247.1
Hypothetical protein.
 
   0.921
SIS02064.1
Hypothetical protein.
 
   0.921
SIR38300.1
Signal transduction histidine kinase.
   
 0.823
SIR38255.1
Protein of unknown function.
 
  
 0.820
SIR38344.1
Protein of unknown function.
 
  
 0.820
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.