STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_00933Unannotated protein. (410 aa)    
Predicted Functional Partners:
GCA_000718255_00935
Unannotated protein.
 
     0.898
GCA_000718255_00934
Unannotated protein.
 
     0.871
GCA_000718255_00936
Unannotated protein.
 
     0.850
GCA_000718255_00302
Unannotated protein.
 
  
 
0.837
GCA_000718255_01527
Unannotated protein.
  
 0.794
GCA_000718255_01531
Unannotated protein.
  
 0.794
GCA_000718255_00937
Unannotated protein.
 
     0.776
GCA_000718255_05256
Unannotated protein.
  
  
  0.776
GCA_000718255_02124
Unannotated protein.
  
 
 0.756
GCA_000718255_02456
Unannotated protein.
  
 
 0.756
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.