STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_01173Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_000718255_03429
Unannotated protein.
  
 0.834
GCA_000718255_04700
Unannotated protein.
 
  
 
0.798
GCA_000718255_00248
Unannotated protein.
  
  
  0.743
GCA_000718255_00110
Unannotated protein.
    
  0.640
GCA_000718255_04143
Unannotated protein.
  
     0.613
GCA_000718255_04636
Unannotated protein.
  
     0.610
GCA_000718255_01903
Unannotated protein.
  
  0.597
GCA_000718255_05048
Unannotated protein.
  
  0.569
GCA_000718255_01677
Unannotated protein.
 
     0.565
GCA_000718255_02495
Unannotated protein.
  
     0.564
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.