STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_01970Unannotated protein. (430 aa)    
Predicted Functional Partners:
GCA_000718255_01969
Unannotated protein.
 
  
 0.962
GCA_000718255_01973
Unannotated protein.
 
    0.959
GCA_000718255_01971
Unannotated protein.
 
     0.955
GCA_000718255_01972
Unannotated protein.
 
    0.955
GCA_000718255_01743
Unannotated protein.
    
 0.911
GCA_000718255_01745
Unannotated protein.
  
 
 0.883
GCA_000718255_05266
Unannotated protein.
    
 0.763
GCA_000718255_01966
Unannotated protein.
 
     0.708
GCA_000718255_01967
Unannotated protein.
 
     0.662
GCA_000718255_00133
Unannotated protein.
     
 0.568
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.