STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_02708Unannotated protein. (198 aa)    
Predicted Functional Partners:
GCA_000718255_02709
Unannotated protein.
       0.773
GCA_000718255_02627
Unannotated protein.
  
     0.767
GCA_000718255_00533
Unannotated protein.
  
     0.762
GCA_000718255_04036
Unannotated protein.
  
     0.750
GCA_000718255_05425
Unannotated protein.
  
     0.708
GCA_000718255_04784
Unannotated protein.
  
     0.652
GCA_000718255_01490
Unannotated protein.
  
     0.562
GCA_000718255_02707
Unannotated protein.
 
     0.562
GCA_000718255_04145
Unannotated protein.
    
  0.549
GCA_000718255_04144
Unannotated protein.
    
  0.529
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.