STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_04795Unannotated protein. (208 aa)    
Predicted Functional Partners:
GCA_000718255_03357
Unannotated protein.
 
 0.981
GCA_000718255_03356
Unannotated protein.
   
 0.955
GCA_000718255_03693
Unannotated protein.
     
 0.873
GCA_000718255_05224
Unannotated protein.
  
 0.766
GCA_000718255_00806
Unannotated protein.
  
 
 0.756
GCA_000718255_04079
Unannotated protein.
    
 0.747
GCA_000718255_01906
Unannotated protein.
    
 0.744
GCA_000718255_01153
Unannotated protein.
  
 
  0.740
GCA_000718255_03946
Unannotated protein.
  
 
  0.740
GCA_000718255_00917
Unannotated protein.
    
 0.738
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.