STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET52459.1Raffinose/stachyose/melibiose transport system substrate-binding protein. (452 aa)    
Predicted Functional Partners:
SET52406.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.991
SET52434.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.931
SEU03135.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.793
SET55481.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.788
SEU30470.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.788
SET52352.1
Hypothetical protein.
 
     0.752
SET52492.1
Transcriptional regulator, LacI family.
 
     0.748
SET94335.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.665
SEU03151.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.665
SEU25960.1
Hypothetical protein.
  
     0.601
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.