Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SET84274.1Hypothetical protein. (463 aa)    
Predicted Functional Partners:
SET84316.1
Hypothetical protein.
 
     0.868
SET84297.1
N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit.
 
     0.867
SEU27252.1
Hypothetical protein.
 
     0.785
SET51010.1
N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit.
 
     0.783
SEU32028.1
N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit.
 
     0.773
SET84364.1
YhcH/YjgK/YiaL family protein.
 
     0.473
SET84255.1
DNA-binding transcriptional regulator, GntR family.
       0.458
SEU07656.1
Hypothetical protein.
  
     0.453
SEU24888.1
Hypothetical protein.
  
     0.432
SET84342.1
3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.416
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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