STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU00694.1Stage III sporulation protein AB. (176 aa)    
Predicted Functional Partners:
SEU00683.1
Stage III sporulation protein AA.
 
  
 0.999
SEU00737.1
Stage III sporulation protein AD.
 
  
 0.990
SEU00752.1
Stage III sporulation protein AE.
 
  
 0.989
SEU00786.1
Stage III sporulation protein AG.
 
  
 0.989
SEU00713.1
Stage III sporulation protein AC.
 
  
 0.987
SEU00769.1
Stage III sporulation protein AF.
 
  
 0.980
SEU00802.1
Stage III sporulation protein AH.
 
  
 0.964
SET52241.1
Stage II sporulation protein P.
  
  
 0.838
SEU32659.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.818
SEU30879.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.787
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.