STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU22617.1L-gulonate 5-dehydrogenase. (362 aa)    
Predicted Functional Partners:
SEU27372.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.958
SEU25446.1
PTS system IIA component, Fru family /PTS system IIB component, Fru family /PTS system IIC component, Fru family.
  
 
 0.827
SEU33321.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.827
SEU22623.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
 
 0.795
SEU25182.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.795
SEU22608.1
Mannonate dehydratase.
  
  
 0.793
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.792
SEU22594.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SEU22603.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SEU26905.1
Fructuronate reductase.
    
 0.772
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.