STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU23428.1Putative zinc ribbon domain-containing protein. (82 aa)    
Predicted Functional Partners:
SEU23422.1
Transcriptional regulator, TetR family.
 
     0.954
SEU23436.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.899
SET90872.1
Hypothetical protein.
  
     0.542
SEU10512.1
Hypothetical protein.
  
     0.542
SET70366.1
Hypothetical protein.
  
     0.540
SEU28786.1
Hypothetical protein.
  
     0.540
SEU13360.1
Chemotaxis protein CheX.
  
     0.509
SEU27640.1
Protein of unknown function.
  
     0.459
SEU11703.1
Acetyltransferase (GNAT) family protein.
  
     0.456
SEU26257.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.