STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU23580.1Probable phosphoglycerate mutase. (232 aa)    
Predicted Functional Partners:
SEU23588.1
Formate C-acetyltransferase.
     
 0.701
SEU23604.1
Fructose-6-phosphate aldolase, TalC/MipB family.
  
 
 0.673
SEU29928.1
Protein of unknown function.
   
 0.622
SEU23595.1
Pyruvate formate lyase activating enzyme.
       0.601
cobS
Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
 
 0.594
SET98407.1
TPR repeat-containing protein.
  
 
 0.587
SET86142.1
Hypothetical protein.
  
     0.578
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
 0.569
SEU23275.1
Putative aldouronate transport system substrate-binding protein.
  
     0.563
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.546
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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