STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU24404.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
SEU24742.1
Dockerin type I repeat-containing protein.
    
 0.927
SEU24409.1
Hypothetical protein.
   
   0.858
SET72449.1
RHS repeat-associated core domain-containing protein.
  
 
 0.822
SEU24398.1
Phage tail-collar fibre protein.
       0.778
SEU24389.1
Phage tail protein, P2 protein I family.
       0.751
SEU24377.1
Phage baseplate assembly protein W.
       0.746
SEU24382.1
Phage-related baseplate assembly protein.
       0.746
SEU24415.1
Hypothetical protein.
       0.726
SEU24372.1
Hypothetical protein.
       0.711
SEU24351.1
Phage tail tape measure protein, TP901 family, core region.
   
   0.682
Your Current Organism:
Desulfotomaculum guttoideum
NCBI taxonomy Id: 58134
Other names: DSM 4024, [. guttoideum, [Desulfotomaculum] guttoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.