Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMG69666.1 | AMG69667.1 | AL531_04530 | AL531_04535 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.965 |
| AMG69666.1 | AMG69668.1 | AL531_04530 | AL531_04540 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.958 |
| AMG69666.1 | AMG69669.1 | AL531_04530 | AL531_04550 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar regulatory protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |
| AMG69666.1 | flgK | AL531_04530 | AL531_04395 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| AMG69666.1 | flgL | AL531_04530 | AL531_04400 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgL; With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| AMG69666.1 | flhA | AL531_04530 | AL531_04270 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.858 |
| AMG69666.1 | fliA | AL531_04530 | AL531_04545 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.923 |
| AMG69666.1 | fliJ | AL531_04530 | AL531_04455 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. | 0.893 |
| AMG69666.1 | fliS | AL531_04530 | AL531_04525 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| AMG69666.1 | fliT | AL531_04530 | AL531_04520 | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| AMG69667.1 | AMG69666.1 | AL531_04535 | AL531_04530 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.965 |
| AMG69667.1 | AMG69668.1 | AL531_04535 | AL531_04540 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| AMG69667.1 | AMG69669.1 | AL531_04535 | AL531_04550 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar regulatory protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| AMG69667.1 | flgK | AL531_04535 | AL531_04395 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| AMG69667.1 | flgL | AL531_04535 | AL531_04400 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgL; With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AMG69667.1 | flhA | AL531_04535 | AL531_04270 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.889 |
| AMG69667.1 | fliA | AL531_04535 | AL531_04545 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.873 |
| AMG69667.1 | fliJ | AL531_04535 | AL531_04455 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar protein FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. | 0.535 |
| AMG69667.1 | fliS | AL531_04535 | AL531_04525 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| AMG69667.1 | fliT | AL531_04535 | AL531_04520 | Flagellin; Structural flagella protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
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