Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMG70485.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
AMG70484.1
Head-tail adaptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.855
AMG70483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
AMG70482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
AMG70488.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.763
AMG70486.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.761
AMG70487.1
Primosome assembly protein PriA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.661
AMG70490.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.659
AMG70491.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
AMG70489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
AMG70481.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.602
Your Current Organism:
Morganella morganii
NCBI taxonomy Id: 582
Other names: ATCC 25830, ATCC 8076H, Bacillus morgani, CCUG 6328, CIP 103763, CIP A231, DSM 30164, IFO 3848, LMG 7874, LMG:7874, M. morganii, NBRC 3848, NCCB 73065, NCIB 235, NCIB:235, NCTC 235, Organism N 1, Proteus morganii, Salmonella morgani
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