STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG71277.1Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
AMG72347.1
Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
AMG71276.1
Type III secretion apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
AMG71282.1
Type III secretion system protein InvA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
AMG71289.1
Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.962
AMG71284.1
Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
AMG71275.1
Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
AMG71280.1
ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.933
AMG71278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.921
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
 
 0.866
Your Current Organism:
Morganella morganii
NCBI taxonomy Id: 582
Other names: ATCC 25830, ATCC 8076H, Bacillus morgani, CCUG 6328, CIP 103763, CIP A231, DSM 30164, IFO 3848, LMG 7874, LMG:7874, M. morganii, NBRC 3848, NCCB 73065, NCIB 235, NCIB:235, NCTC 235, Organism N 1, Proteus morganii, Salmonella morgani
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