STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0401600N-ethylmaleimide-sensitive fusion protein, putative. (777 aa)    
Predicted Functional Partners:
PBANKA_1108600
Alpha-soluble NSF attachment protein, putative.
   
 0.998
PBANKA_0517800
Sec1 family protein, putative; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.984
PBANKA_0307600
Syntaxin, putative.
   
 0.966
PBANKA_1218400
Protein transport protein SEC22, putative; Belongs to the synaptobrevin family.
    
 0.958
PBANKA_1120100
TPR_REGION domain-containing protein.
   
 0.954
PBANKA_1346800
Qa-SNARE protein, putative.
    
 0.943
PBANKA_1209600
BET1-like protein, putative.
    
 0.934
PBANKA_0936300
Protein transport protein BOS1, putative.
   
 0.933
PBANKA_0415500
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.918
PBANKA_1418800
SNARE protein, putative.
   
 
 0.912
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.