STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0104700Elongation of fatty acids protein. (288 aa)    
Predicted Functional Partners:
PBANKA_0820900
Elongation of fatty acids protein.
  
  
 0.995
PBANKA_0912700
3-oxo-5-alpha-steroid 4-dehydrogenase, putative.
    
 0.948
PBANKA_1346500
Protein tyrosine phosphatase-like protein.
    
 0.925
PBANKA_0522400
Steroid dehydrogenase, putative.
   
 0.913
PBANKA_1110700
Stearoyl-CoA desaturase, putative; Belongs to the fatty acid desaturase type 1 family.
   
 
 0.610
MED6
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 
  0.516
PBANKA_1038300
Translocation associated membrane protein, putative.
   
 
 0.477
PBANKA_1107800
Longevity-assurance (LAG1) protein, putative.
   
 
 0.477
PBANKA_1118700
Acyl-CoA synthetase, putative.
    
 0.469
PBANKA_1207600
Uncharacterized protein.
    
 0.469
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.