STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0105700MYND-type zinc finger protein, putative. (468 aa)    
Predicted Functional Partners:
PBANKA_1014700
Uncharacterized protein.
   
 0.943
PBANKA_0800300
Uncharacterized protein.
   
 0.874
PBANKA_1000500
GRAM domain-containing protein.
   
 0.874
PBANKA_1331300
Uncharacterized protein.
    
 0.779
PBANKA_0909900
WD repeat-containing protein, putative.
    
 0.768
PBANKA_0926900
WD repeat-containing protein, putative.
    
 0.768
PBANKA_0510600
Cell division cycle protein 20 homolog.
    
 0.768
PBANKA_1110300
WD repeat-containing protein, putative.
    
 0.768
PBANKA_1454500
Polyadenylation factor subunit 2, putative.
    
 0.768
PBANKA_1445200
WD repeat-containing protein, putative.
    
 0.768
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.