STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0203900rRNA biogenesis protein RRP36, putative. (188 aa)    
Predicted Functional Partners:
PBANKA_0305300
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
PBANKA_1203400
U3 small nucleolar RNA-associated protein 25, putative.
   
 0.996
PBANKA_1441500
U3 small nucleolar RNA-interacting protein 2, putative.
   
 0.996
PBANKA_0617600
Pre-rRNA-processing protein ESF2, putative.
   
 
 0.994
PBANKA_1405600
U3 small nucleolar RNA-associated protein 6, putative.
   
 0.993
PBANKA_1439300
WD repeat-containing protein, putative.
   
 0.993
PBANKA_1024300
ATP-dependent RNA helicase DBP4, putative; Belongs to the DEAD box helicase family.
   
 0.990
PBANKA_1031000
MI domain-containing protein.
   
 
 0.986
PBANKA_0937800
Essential nuclear protein 1, putative.
   
 
 0.985
PBANKA_1128400
RNA-binding protein, putative.
   
 
 0.968
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.