STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0513200WD repeat-containing protein, putative. (565 aa)    
Predicted Functional Partners:
PBANKA_1028400
60S ribosomal protein L10, putative.
    
 
 0.993
PBANKA_0714800
Ribosome assembly protein RRB1, putative.
   
  
 0.863
PBANKA_1008000
Uncharacterized protein.
    
 
 0.855
A0A509AT93
Apicoplast ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.855
PBANKA_0521200
Uncharacterized protein.
     
 0.643
PBANKA_1462500
Leucine-rich repeat protein.
     
 0.643
PBANKA_0213400
60S ribosomal export protein NMD3, putative.
   
  
 0.621
PBANKA_1143500
Ribosome biogenesis protein MRT4, putative.
   
  
 0.613
PBANKA_1211500
U3 small nucleolar RNA-associated protein 13, putative.
   
    0.550
PBANKA_1439300
WD repeat-containing protein, putative.
   
  
 0.537
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.