STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0211600mTERF domain-containing protein, putative. (720 aa)    
Predicted Functional Partners:
PBANKA_1338600
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
    
   0.839
PBANKA_0708800
Ribosomal protein L4, mitochondrial, putative.
    
   0.656
PBANKA_1106700
60S ribosomal protein L4, putative.
    
   0.656
PBANKA_1423600
40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family.
    
   0.656
PBANKA_1302100
50S ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.634
PBANKA_0520400
Dynamin-like protein, putative; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.631
PBANKA_0903600
Dynamin-like protein, putative; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.631
PBANKA_1434100
Dynamin-like protein, putative.
     
 0.631
PBANKA_0108500
Mitochondrial ribosomal protein L19, putative.
   
 
 0.614
PBANKA_0922100
40S ribosomal protein S18, putative; Belongs to the universal ribosomal protein uS13 family.
   
   0.604
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.