STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0316000Replication factor C subunit 1. (861 aa)    
Predicted Functional Partners:
PBANKA_0314700
Replication factor C subunit 2, putative.
   
0.999
PBANKA_0936500
Replication factor C subunit 5, putative.
   
 0.999
PBANKA_1326800
Replication factor C subunit 3, putative.
   
0.999
PBANKA_1455100
Replication factor C subunit 4, putative.
   
0.999
PBANKA_0207400
3'-5' exonuclease, putative.
   
 0.998
PBANKA_1014800
ADP-dependent DNA helicase RecQ, putative.
   
 0.998
PBANKA_1137900
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.967
PBANKA_1441400
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.967
PBANKA_1326900
DNA polymerase alpha subunit B, putative.
   
 0.953
PBANKA_1129100
DNA polymerase epsilon catalytic subunit A, putative.
   
 0.950
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.