STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0602800Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
PBANKA_0404200
Ubiquitin-conjugating enzyme E2, putative.
   
 0.958
PBANKA_1141700
Ubiquitin-60S ribosomal protein L40, putative.
   
 0.957
PBANKA_1039400
Ribosomal protein S27a, putative.
   
 0.946
PBANKA_1123400
Anaphase-promoting complex subunit 11, putative.
    
 0.914
PBANKA_0315600
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.875
PBANKA_0610300
Polyubiquitin, putative.
   
 0.867
PBANKA_0721700
Ran-specific GTPase-activating protein 1, putative.
   
 0.865
PBANKA_0704100
Ubiquitin conjugation factor E4 B, putative.
    
 0.858
PBANKA_0806200
E3 ubiquitin-protein ligase RBX1, putative.
   
 0.853
PBANKA_1347900
Ubiquitin activating enzyme, putative.
   
 0.849
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.