STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0315800Ribosome associated membrane protein RAMP4, putative. (68 aa)    
Predicted Functional Partners:
PBANKA_0709000
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.777
PBANKA_1206100
Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs.
      
 0.682
PBANKA_0306900
Sec61-gamma subunit of protein translocation complex, putative.
   
 
 0.646
PBANKA_1346800
Qa-SNARE protein, putative.
     
 0.616
PBANKA_1016000
Heme/steroid binding domain containing protein, putative; Belongs to the cytochrome b5 family.
     
 0.529
PBANKA_1447000
Cytochrome b5, putative; Belongs to the cytochrome b5 family.
     
 0.529
PBANKA_0822500
Tetratricopeptide repeat protein, putative.
    
 0.498
PBANKA_1332500
Pre-rRNA-processing protein PNO1, putative.
   
  
 0.490
PBANKA_0410200
Tetratricopeptide repeat protein, putative.
    
 0.486
PBANKA_0938100
Tetratricopeptide repeat protein, putative.
    
 0.486
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.