STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0623200Lysophospholipase, putative. (578 aa)    
Predicted Functional Partners:
PBANKA_1011400
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
      
 0.630
PBANKA_0305600
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.580
PBANKA_0606800
Acyl carrier protein, mitochondrial, putative.
  
 
 0.580
PBANKA_1010100
Mitochondrial import inner membrane translocase subunit TIM17, putative.
   
   0.545
PBANKA_0810000
Mitochondrial carrier protein, putative; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.505
PBANKA_1203100
ADP/ATP carrier protein, putative; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.505
PBANKA_1144600
Mitochondrial carrier protein, putative; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.505
PBANKA_1326300
Cytochrome c1, putative.
   
  
 0.486
PBANKA_1210700
Cytochrome b-c1 complex subunit 7, putative.
   
  
 0.474
PBANKA_0821900
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.405
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.