STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0416500Copper-transporting ATPase. (1950 aa)    
Predicted Functional Partners:
PBANKA_0404700
Glutaredoxin 1, putative.
   
 
 0.737
PBANKA_1302900
Copper transporter, putative.
    
 
 0.720
PBANKA_1238600
Divalent metal transporter, putative.
  
 
 0.691
PBANKA_1219400
Protein SCO1, putative.
     
 0.657
PBANKA_0509800
Cytochrome c oxidase copper chaperone, putative.
      
 0.654
PBANKA_1139700
Protein AMR1, putative.
  
  
 0.653
PBANKA_0608000
Porphobilinogen deaminase.
  
  
 0.637
PBANKA_0209300
Actin-related protein; Belongs to the actin family.
      
 0.629
PBANKA_0720800
RNA-binding protein NOB1, putative; Belongs to the NOB1 family.
      
 0.628
PBANKA_0517600
Plasmepsin VII; Belongs to the peptidase A1 family.
    
 
 0.626
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.