STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0511000Biotin--protein ligase 1. (287 aa)    
Predicted Functional Partners:
PBANKA_1332800
Acetyl-CoA carboxylase.
  
 0.831
PBANKA_0719300
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.792
PBANKA_1139700
Protein AMR1, putative.
  
  
 0.756
PBANKA_0927800
tRNA nucleotidyltransferase, putative; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.538
PBANKA_0304300
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.483
PBANKA_1135400
Riboflavin kinase, putative.
     
 0.482
PBANKA_0823100
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
  
 0.470
PBANKA_1464100
Coronin; Belongs to the WD repeat coronin family.
  
  
 0.434
PBANKA_1338200
Beta-hydroxyacyl-ACP dehydratase, putative.
  
  
 0.432
PBANKA_1410500
Malonyl CoA-acyl carrier protein transacylase, putative.
     
 0.431
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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