STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0823100S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (402 aa)    
Predicted Functional Partners:
PBANKA_0211400
DNA (Cytosine-5)-methyltransferase, putative.
    
 0.964
PBANKA_1212400
GDP-L-fucose synthase, putative.
   
 0.951
PBANKA_0208700
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative.
  
  
 0.885
PBANKA_1235600
Adenosylhomocysteinase.
  
 
 0.881
PBANKA_0306400
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
    
 0.850
PBANKA_0823400
Phosphoglycerate kinase.
  
 
 0.789
PBANKA_0919300
Spermidine synthase, putative; Belongs to the spermidine/spermine synthase family.
  
  
 0.761
PBANKA_1017600
Uncharacterized protein.
  
 
 0.754
PBANKA_1313800
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.737
PBANKA_1448300
Homocysteine S-methyltransferase, putative.
  
  
 0.735
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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