STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0801200Erythrocyte membrane-associated antigen, putative. (2037 aa)    
Predicted Functional Partners:
PBANKA_1342900
Regulator of nonsense transcripts 3B, putative.
    
 0.901
PBANKA_1036200
RNA-binding protein 8A, putative.
    
 0.778
PBANKA_0717500
Nuclear cap-binding protein subunit 2.
   
 0.775
PBANKA_0515900
mRNA-decapping enzyme subunit 1, putative.
    
 0.763
PBANKA_0100500
BIR protein.
   
 0.749
PBANKA_0306100
6-cysteine protein P230.
   
 0.749
PBANKA_0826600
Armadillo repeat protein, putative.
   
 0.749
PBANKA_0800900
Uncharacterized protein.
   
 0.749
PBANKA_0309100
Peptide chain release factor subunit 1, putative.
   
 0.716
PBANKA_0924900
Translation elongation factor EF-1, subunit alpha, putative.
    
 0.716
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.