STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0806200E3 ubiquitin-protein ligase RBX1, putative. (107 aa)    
Predicted Functional Partners:
PBANKA_1142900
Suppressor of kinetochore protein 1, putative; Belongs to the SKP1 family.
   
 0.998
PBANKA_0807500
CPSF_A domain-containing protein.
    
 0.994
PBANKA_0821900
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.992
PBANKA_1411400
Ubiquitin-like protein nedd8 homologue, putative.
   
 0.982
PBANKA_1458500
NEDD8-conjugating enzyme UBC12, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.980
PBANKA_1128600
Cullin-like protein, putative; Belongs to the cullin family.
    
 0.962
PBANKA_1426500
Cullin-1, putative; Belongs to the cullin family.
    
 0.962
PBANKA_0942400
WD repeat-containing protein, putative.
    
 0.958
PBANKA_1413900
Zinc finger (CCCH type) protein, putative.
    
 0.958
PBANKA_0925100
Leucine-rich repeat protein.
    
 0.946
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.