STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0716500RNA-binding protein, putative. (388 aa)    
Predicted Functional Partners:
PBANKA_1122000
Nuclear polyadenylated RNA-binding protein NAB2, putative.
    
 
 0.888
PBANKA_1126400
Transportin, putative.
   
 
 0.806
PBANKA_0833800
CSTF domain-containing protein, putative.
    
 0.683
PBANKA_1241300
Suf domain-containing protein.
   
 
 0.555
PBANKA_0508400
RNA-binding protein, putative.
   
 0.554
PBANKA_1018400
Protein arginine N-methyltransferase 1, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.550
PBANKA_1426000
Histone-arginine methyltransferase CARM1, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.550
PBANKA_1103000
Serine/arginine-rich splicing factor 12, putative.
  
 
 0.510
A0A509AIR2
RNA-binding protein, putative.
   
 0.489
PBANKA_0506600
Serine/arginine-rich splicing factor 4, putative.
   
 0.489
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.