STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0413600Zinc finger protein, putative. (265 aa)    
Predicted Functional Partners:
PBANKA_1023300
Cleavage and polyadenylation specificity factor subunit 4, putative.
   
  
 0.689
PBANKA_0213600
mRNA (N6-adenosine)-methyltransferase, putative; Belongs to the MT-A70-like family.
    
 
 0.676
PBANKA_1450100
mRNA methyltransferase, putative; Belongs to the MT-A70-like family.
    
 
 0.676
PBANKA_1223500
DNA helicase PSH3, putative.
   
  
 0.524
PBANKA_1030800
Methyltransferase, putative.
      
 0.495
PBANKA_1462700
THO complex subunit 2, putative.
    
 
 0.491
PBANKA_0315600
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
     
 0.463
PBANKA_0610300
Polyubiquitin, putative.
     
 0.463
PBANKA_0922200
Autophagy-related protein 7, putative.
     
 0.433
PBANKA_1411400
Ubiquitin-like protein nedd8 homologue, putative.
     
 0.433
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.