STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0826000Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (313 aa)    
Predicted Functional Partners:
PBANKA_1422400
Importin subunit beta, putative.
    
   0.975
PBANKA_0111200
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
 
 
   0.943
PBANKA_0917400
Armadillo repeat protein PF16.
    
   0.838
PBANKA_1320400
Uncharacterized protein.
    
   0.838
PBANKA_1425100
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.838
PBANKA_1120300
mRNA-binding protein PUF3, putative.
   
 
 0.836
PBANKA_0512500
Nucleolar preribosomal assembly protein, putative.
   
   0.826
PBANKA_1036300
RNA-binding protein, putative.
   
   0.823
PBANKA_0213500
Ribosome biogenesis protein BRX1, putative.
   
   0.819
PBANKA_1343800
Transcriptional regulatory protein sir2a.
    
 0.816
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.