STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0905500Uncharacterized protein. (846 aa)    
Predicted Functional Partners:
PBANKA_0315600
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.653
PBANKA_0610300
Polyubiquitin, putative.
   
 0.650
PBANKA_1210100
DNA repair protein RAD23, putative.
   
 0.630
PBANKA_0816100
SUMO-conjugating enzyme UBC9, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.601
PBANKA_0105000
Ubiquitin-conjugating enzyme E2 PEX4, putative.
    
 0.598
PBANKA_0602800
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.598
PBANKA_1241900
Ubiquitin-conjugating enzyme E2 N, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.598
PBANKA_1411400
Ubiquitin-like protein nedd8 homologue, putative.
   
 0.585
PBANKA_0934200
Ubiquitin domain-containing protein DSK2, putative.
   
 0.577
PBANKA_0916400
Ubiquitin-like protein, putative.
   
 0.577
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.