STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_061340030S ribosomal protein S12, mitochondrial, putative. (341 aa)    
Predicted Functional Partners:
PBANKA_0315600
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
PBANKA_0619100
40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family.
  
 0.989
PBANKA_0414600
40S ribosomal protein S15A, putative; Belongs to the universal ribosomal protein uS8 family.
  
 0.988
PBANKA_0807600
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS17 family.
  
 0.987
PBANKA_0922100
40S ribosomal protein S18, putative; Belongs to the universal ribosomal protein uS13 family.
  
 0.987
PBANKA_1329300
40S ribosomal protein S3, putative.
  
 0.987
PBANKA_1245600
Ribosomal protein S16, mitochondrial, putative.
  
 0.987
PBANKA_1416300
40S ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
  
 0.987
PBANKA_1231000
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS11 family.
  
 0.987
PBANKA_1355100
40S ribosomal protein S6, putative.
   
 0.986
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.