STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0931600Guanine nucleotide-exchange factor SEC12, putative. (423 aa)    
Predicted Functional Partners:
PBANKA_0718800
Small GTP-binding protein sar1, putative; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.996
PBANKA_0708000
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.908
PBANKA_1137200
Protein transport protein Sec24A, putative.
   
 
 0.870
PBANKA_1026600
Protein SEY1 homolog; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
   0.843
PBANKA_1002800
Protein transport protein Sec24B, putative.
   
 0.834
PBANKA_0936300
Protein transport protein BOS1, putative.
     
 0.816
PBANKA_1346800
Qa-SNARE protein, putative.
   
 
 0.809
PBANKA_1445400
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 
 0.707
PBANKA_0209200
Parasite-infected erythrocyte surface protein.
   
 
 0.700
PBANKA_0311000
Protein transport protein SEC31, putative.
   
  
 0.688
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.