STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1139700Protein AMR1, putative. (669 aa)    
Predicted Functional Partners:
PBANKA_0823300
Para-aminobenzoic acid synthetase, putative.
  
 
 0.999
PBANKA_0304000
Pentafunctional AROM polypeptide, putative.
  
 
 0.951
PBANKA_1350700
Tryptophan--tRNA ligase, putative.
  
  
 0.882
PBANKA_1426700
Hydroxymethyldihydropterin pyrophosphokinase-dihydropteroate synthase, putative.
  
  
 0.880
PBANKA_1121900
Chorismate synthase.
  
  
 0.877
PBANKA_1463700
DNA repair protein rhp16, putative.
  
  
 0.873
PBANKA_1464700
Tryptophan--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.865
PBANKA_0304300
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.861
PBANKA_1318100
Aminopeptidase P, putative; Belongs to the peptidase M24B family.
  
  
 0.855
PBANKA_0814900
Arginine--tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.852
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.